RPluto Documentation
Use of this program is permitted solely for non-commercial purposes in accordance with the full conditions of use.
Changes incorporated in the latest version of the program are described here.
- Introduction
- Running RPluto
- Atom and molecule selection
- Base residues
- Atom selection
- Packing diagrams
- Packing slices
- Network expansion
- Editing the molecule list
- Geometric objects and measurements
- Hydrogen atom positions
- Bond type assignments
- Intermolecular contacts and hydrogen bonds
- Intermolecular contacts
- Hydrogen bonds
- Graph Sets
- Intermolecular interaction energies
- Approximate molecular symmetry detection
- Unit cell transformations
- Rendering options
- Plot styles
- Plot view
- Labelling and annotation
- Colour modes
- Input and Output options
- Crystallographic input
- Graphical output
- Crystallographic output
- File formats
- FDAT format specification
- COOR format specification
- Free format specification
- Multiple structure display
- Graphics configuration options